MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,754
rRNA: 21
tRNA: 78
tmRNA: 1
Total number of protein coding genes annotated/found:
4,625
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Items 61 - 80
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5033|JADGMH010000013.1
MBF0791615.1
Genome Viewer
NA
AA
1539/513
84299-82761
aldehyde dehydrogenase AldB
SEQF5033|JADGMH010000002.1
MBF0788884.1
Genome Viewer
NA
AA
849/283
41024-40176
DNA-3-methyladenine glycosylase 2
SEQF5033|JADGMH010000002.1
MBF0789018.1
Genome Viewer
NA
AA
651/217
195992-195342
DNA oxidative demethylase AlkB
SEQF5033|JADGMH010000001.1
MBF0788681.1
Genome Viewer
NA
AA
483/161
326348-326830
ureidoglycolate lyase
SEQF5033|JADGMH010000001.1
MBF0788687.1
Genome Viewer
NA
AA
1362/454
333045-334406
allantoinase AllB
SEQF5033|JADGMH010000001.1
MBF0788691.1
Genome Viewer
NA
AA
1236/412
339090-337855
allantoate deiminase
SEQF5033|JADGMH010000001.1
MBF0788692.1
Genome Viewer
NA
AA
1050/350
340161-339112
ureidoglycolate dehydrogenase
SEQF5033|JADGMH010000001.1
MBF0788690.1
Genome Viewer
NA
AA
786/262
337844-337059
(S)-ureidoglycine aminohydrolase
SEQF5033|JADGMH010000001.1
MBF0788682.1
Genome Viewer
NA
AA
816/272
326908-327723
HTH-type transcriptional repressor AllR
SEQF5033|JADGMH010000001.1
MBF0788680.1
Genome Viewer
NA
AA
927/309
326118-325192
HTH-type transcriptional activator AllS
SEQF5033|JADGMH010000009.1
MBF0791098.1
Genome Viewer
NA
AA
1080/360
143908-142829
alanine racemase
SEQF5033|JADGMH010000009.1
MBF0791048.1
Genome Viewer
NA
AA
1533/511
79603-81135
D-allose ABC transporter ATP-binding protein AlsA
SEQF5033|JADGMH010000009.1
MBF0791047.1
Genome Viewer
NA
AA
936/312
78541-79476
D-allose transporter substrate-binding protein
SEQF5033|JADGMH010000009.1
MBF0791049.1
Genome Viewer
NA
AA
981/327
81114-82094
D-allose ABC transporter permease
SEQF5033|JADGMH010000009.1
MBF0791050.1
Genome Viewer
NA
AA
696/232
82105-82800
D-allulose-6-phosphate 3-epimerase
SEQF5033|JADGMH010000009.1
MBF0791051.1
Genome Viewer
NA
AA
930/310
82784-83713
allose kinase
SEQF5033|JADGMH010000009.1
MBF0791046.1
Genome Viewer
NA
AA
891/297
77592-78482
als operon DNA-binding transcriptional repressor AlsR
SEQF5033|JADGMH010000008.1
MBF0790793.1
Genome Viewer
NA
AA
966/322
52614-53579
TerC family membrane protein Alx
SEQF5033|JADGMH010000002.1
MBF0789211.1
Genome Viewer
NA
AA
870/290
418755-419624
N-acetylmuramoyl-L-alanine amidase AmiA
SEQF5033|JADGMH010000007.1
MBF0790678.1
Genome Viewer
NA
AA
1332/444
176278-174947
N-acetylmuramoyl-L-alanine amidase AmiB
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Items 61 - 80
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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